retrieve grouping information from a SummarizedExperiment
object. This
is stored within the metadata()
of the object.
Examples
group_by(se_simple, rows(direction), cols(condition)) |> group_data()
#> $row_groups
#> # A tibble: 2 × 3
#> direction .indices .indices_group_id
#> <chr> <list> <int>
#> 1 - <int [2]> 1
#> 2 + <int [3]> 2
#>
#> $col_groups
#> # A tibble: 2 × 3
#> condition .indices .indices_group_id
#> <chr> <list> <int>
#> 1 cntrl <int [2]> 1
#> 2 drug <int [2]> 2
#>
#> attr(,"class")
#> [1] "plyxp_groups"
#> attr(,"type")
#> [1] "rowcol"